BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E01LP1|AL429905
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1562 1641 0.0
>3x_Contig1562
Length = 11773
Score = 1641 bits (821), Expect = 0.0
Identities = 844/859 (98%)
Strand = Plus / Plus
Query: 1 gagaattgctccagttaacaaacatatctgawaatttcaaatggttaatcctgamaacgg 60
||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||
Sbjct: 8593 gagaattgctccagttaacaaacatatctgatactttcaaatggttaatcctgacaacgg 8652
Query: 61 ctgcagcaaattactacgcatcaaaataaatccccgaaaagttcaaacatttgttcaaga 120
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 8653 ctgcagctaattactacgcatcaaaatatatccccgaaaagttcaaacatttgttcaaga 8712
Query: 121 agaaacaaagtagcaagaaawamaagaacattgacaggaagcagcaacagcwaaactttg 180
|||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||
Sbjct: 8713 agaaacaaagtagcaagaaatacaagaacattgacaggaagcagcaacagctaaactttg 8772
Query: 181 tatagattgaaatatttactgtgtatacggaaatgcttctacctgtatctttcttcggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8773 tatagattgaaatatttactgtgtatacggaaatgcttctacctgtatctttcttcggta 8832
Query: 241 ttgtttgtctcactaaattacaaggagtttgaagaatttctcattgaaaggaaacagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8833 ttgtttgtctcactaaattacaaggagtttgaagaatttctcattgaaaggaaacagttc 8892
Query: 301 catagaacgccaaccgatgaactgaagggaacctgtaggtgtttagggaccattaaaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8893 catagaacgccaaccgatgaactgaagggaacctgtaggtgtttagggaccattaaaaaa 8952
Query: 361 wtgatgaactgaaccagcggccaaacaagaaaattgcatcccaacgtagtaatgtatatg 420
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 8953 ttgatgaactgaaccagcggccaaacaagataattgcatcccaacgtagtaatgtatatg 9012
Query: 421 tttctgattttaatttggaaagawtctgcatcaccatgttccataatawagtttgaatac 480
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 9013 tttctgattttaatttggaaagattctgcatcaccatgttccataatatagtttgaatac 9072
Query: 481 atgaagaaacagtataaagaaattggagaataaaccaattgawctgatagcactctttcc 540
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 9073 atgaagaaacagtataaagaaattggagaataaaccaattgatctgatagcactctttcc 9132
Query: 541 aggacttgaaccaccgttggatcctcggtataaaaataatttaagaatttgtaccacggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9133 aggacttgaaccaccgttggatcctcggtataaaaataatttaagaatttgtaccacggt 9192
Query: 601 acttgaaagaatgataggaaccagccccaggacataaaacagawccatctgtaaaagctg 660
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 9193 acttgaaagaatgataggaaccagccccaggacataaaacagatccatctgtaaaagctg 9252
Query: 661 aaaagctcattgttagacgacgatgtaccatcagcatcgtaatccaagtttgagtyaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9253 aaaagctcattgttagacgacgatgtaccatcagcatcgtaatccaagtttgagtcaaga 9312
Query: 721 tcccagtcatgacgaagctctgaatcaatgccaggactagcattgcgagtatccgtttga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9313 tcccagtcatgacgaagctctgaatcaatgccaggactagcattgcgagtatccgtttga 9372
Query: 781 ccctcgaaagaaggtctctcgacaccatagtcgttgaatatcgagacgttgtcactataa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9373 ccctcgaaagaaggtctctcgacaccatagtcgttgaatatcgagacgttgtcactataa 9432
Query: 841 ttatcatcaaaggattccg 859
|||||||||||||||||||
Sbjct: 9433 ttatcatcaaaggattccg 9451
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6726
Number of Sequences: 1807
Number of extensions: 6726
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)